torchdrug.datasets ================== .. currentmodule:: torchdrug.datasets Knowledge Graph Datasets ------------------------ FB15k ^^^^^ .. autoclass:: FB15k :members: FB15k237 ^^^^^^^^ .. autoclass:: FB15k237 :members: WN18 ^^^^ .. autoclass:: WN18 :members: WN18RR ^^^^^^ .. autoclass:: WN18RR :members: Hetionet ^^^^^^^^ .. autoclass:: Hetionet :members: Molecule Property Prediction Datasets ------------------------------------- BACE ^^^^ .. autoclass:: BACE :members: BBBP ^^^^ .. autoclass:: BBBP :members: CEP ^^^ .. autoclass:: CEP :members: ChEMBLFiltered ^^^^^^^^^^^^^^ .. autoclass:: ChEMBLFiltered :members: ClinTox ^^^^^^^ .. autoclass:: ClinTox :members: Delaney ^^^^^^^ .. autoclass:: Delaney :members: FreeSolv ^^^^^^^^ .. autoclass:: FreeSolv :members: HIV ^^^ .. autoclass:: HIV :members: Lipophilicity ^^^^^^^^^^^^^ .. autoclass:: Lipophilicity :members: MUV ^^^ .. autoclass:: MUV :members: Malaria ^^^^^^^ .. autoclass:: Malaria :members: OPV ^^^ .. autoclass:: OPV :members: QM8 ^^^ .. autoclass:: QM8 :members: QM9 ^^^ .. autoclass:: QM9 :members: SIDER ^^^^^ .. autoclass:: SIDER :members: Tox21 ^^^^^ .. autoclass:: Tox21 :members: ToxCast ^^^^^^^ .. autoclass:: ToxCast :members: ZINC250k ^^^^^^^^ .. autoclass:: ZINC250k :members: ZINC2m ^^^^^^ .. autoclass:: ZINC2m :members: MOSES ^^^^^ .. autoclass:: MOSES :members: PCQM4M ^^^^^^ .. autoclass:: PCQM4M :members: Protein Property Prediction Datasets ------------------------------------ BetaLactamase ^^^^^^^^^^^^^ .. autoclass:: BetaLactamase :members: Fluorescence ^^^^^^^^^^^^ .. autoclass:: Fluorescence :members: Stability ^^^^^^^^^ .. autoclass:: Stability :members: Solubility ^^^^^^^^^^ .. autoclass:: Solubility :members: BinaryLocalization ^^^^^^^^^^^^^^^^^^ .. autoclass:: BinaryLocalization :members: SubcellularLocalization ^^^^^^^^^^^^^^^^^^^^^^^ .. autoclass:: SubcellularLocalization :members: EnzymeCommission ^^^^^^^^^^^^^^^^ .. autoclass:: EnzymeCommission :members: GeneOntology ^^^^^^^^^^^^ .. autoclass:: GeneOntology :members: AlphaFoldDB ^^^^^^^^^^^ .. autoclass:: AlphaFoldDB :members: Protein Structure Prediction Datasets ------------------------------------- Fold ^^^^ .. autoclass:: Fold :members: SecondaryStructure ^^^^^^^^^^^^^^^^^^ .. autoclass:: SecondaryStructure :members: ProteinNet ^^^^^^^^^^ .. autoclass:: ProteinNet :members: Protein-Protein Prediction Datasets ----------------------------------- HumanPPI ^^^^^^^^ .. autoclass:: HumanPPI :members: YeastPPI ^^^^^^^^ .. autoclass:: YeastPPI :members: PPIAffinity ^^^^^^^^^^^ .. autoclass:: PPIAffinity :members: Protein Ligand Prediction Datasets ---------------------------------- BindingDB ^^^^^^^^^ .. autoclass:: BindingDB :members: PDBBind ^^^^^^^ .. autoclass:: PDBBind :members: Retrosynthesis Datasets ----------------------- USPTO50k ^^^^^^^^ .. autoclass:: USPTO50k :members: Citation Network Datasets ------------------------- Cora ^^^^ .. autoclass:: Cora :members: CiteSeer ^^^^^^^^ .. autoclass:: CiteSeer :members: PubMed ^^^^^^ .. autoclass:: PubMed :members: